Research workbench
T4H2 T cell receptor bound to HLA-A2 presenting GP100T2M peptide (imdqvpfsv)
Analyse T4H2 T cell receptor bound to HLA-A2 presenting GP100T2M peptide (imdqvpfsv) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6VM9
- Type
- protein
- Length
- 825 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A5B8RNS7, P61769, P40967
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 275 | — | A0A5B8RNS7 |
| B | — | protein | 100 | — | P61769 |
| C | — | protein | 9 | — | P40967 |
| D | — | protein | 201 | — | — |
| E | — | protein | 240 | — | — |
Compared structures
- 6VM9 · T4H2 T cell receptor bound to HLA-A2 presenting gp100T2M peptide (IMDQVPFSV) · the same entry in another collection · chain B against B, TM-score 1.00
- P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain B against A, TM-score 0.98
- P40967 · AlphaFold monomer V2.0 prediction for melanocyte protein pmel (P40967) · a predicted model of the same protein · chain C against A, TM-score 0.33
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A5B8RNS7
- Every structure of UniProt P61769
- Every structure of UniProt P40967
- Elsewhere: RCSB PDB 6VM9 · PDBe 6VM9 · UniProt A0A5B8RNS7 · UniProt P61769 · UniProt P40967
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