Research workbench
Negative stain reconstruction of the yeast exocyst octameric complex.
Analyse Negative stain reconstruction of the yeast exocyst octameric complex. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6VKL
- Type
- protein
- Length
- 5,982 residues
- Chains
- 8
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P33332, P89102, P32844, P32855, Q06245, P22224, P19658, P38261
Structure
electron microscopy · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 672 | — | P33332 |
| B | — | protein | 928 | — | P89102 |
| C | — | protein | 794 | — | P32844 |
| D | — | protein | 954 | — | P32855 |
| E | — | protein | 776 | — | Q06245 |
| F | — | protein | 725 | — | P22224 |
| G | — | protein | 615 | — | P19658 |
| H | — | protein | 518 | — | P38261 |
Compared structures
- 6VKL · Negative stain reconstruction of the yeast exocyst octameric complex. · the same entry in another collection · chain H against H, TM-score 1.00
- P32844 · AlphaFold monomer V2.0 prediction for exocyst complex component SEC6 (P32844) · a predicted model of the same protein · chain C against A, TM-score 0.78
- P32855 · AlphaFold monomer V2.0 prediction for exocyst complex component SEC8 (P32855) · a predicted model of the same protein · chain D against A, TM-score 0.72
- P89102 · AlphaFold monomer V2.0 prediction for exocyst complex component SEC5 (P89102) · a predicted model of the same protein · chain B against A, TM-score 0.69
- P22224 · AlphaFold monomer V2.0 prediction for exocyst complex component SEC15 (P22224) · a predicted model of the same protein · chain F against A, TM-score 0.69
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P33332
- Every structure of UniProt P89102
- Every structure of UniProt P32844
- Every structure of UniProt P32855
- Every structure of UniProt Q06245
- Every structure of UniProt P22224
- Every structure of UniProt P19658
- Every structure of UniProt P38261
- Elsewhere: RCSB PDB 6VKL · PDBe 6VKL · UniProt P33332 · UniProt P89102 · UniProt P32844 · UniProt P32855 · UniProt Q06245 · UniProt P22224 · UniProt P19658 · UniProt P38261
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