Research workbench
The crystal structure of the msp domain of human MOSPD2 in complex with the conventional ffat motif of ORP1.
Analyse The crystal structure of the msp domain of human MOSPD2 in complex with the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6TQS
- Type
- protein
- Length
- 821 residues
- Chains
- 11
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8NHP6, Q9BXW6
- Ligands
- SO4, CL
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 131 | — | Q8NHP6 |
| B | — | protein | 132 | — | Q8NHP6 |
| C | — | protein | 132 | — | Q8NHP6 |
| D | — | protein | 129 | — | Q8NHP6 |
| E | — | protein | 129 | — | Q8NHP6 |
| F | — | protein | 130 | — | Q8NHP6 |
| G, I, J | — | protein | 8 | — | Q9BXW6 |
| H, K | — | protein | 7 | — | Q9BXW6 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 5 copies · chains A, C, E, F
- CL · Chloride ion · ion · chains A
- TFA · trifluoroacetic acid · additive · 6 copies · chains A, D, B, E, C, F
- GOL · Glycerol · additive · 5 copies · chains A, D, F, B, E, C
- PEG · Di(hydroxyethyl)ether · additive · chains C, F
- 1PE · Pentaethylene glycol · additive · chains F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6TQS · The crystal structure of the MSP domain of human MOSPD2 in complex with the conventional… · the same entry in another collection · chain K against K, TM-score 1.00
- Q8NHP6 · AlphaFold monomer V2.0 prediction for motile sperm domain-containing protein 2 (Q8NHP6) · a predicted model of the same protein · chain E against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8NHP6
- Every structure of UniProt Q9BXW6
- Elsewhere: RCSB PDB 6TQS · PDBe 6TQS · UniProt Q8NHP6 · UniProt Q9BXW6
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