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Crystal structure of MLLT1 (enl) yeats domain in complexed with piperazine-urea derivative 2

Analyse Crystal structure of MLLT1 (enl) yeats domain in complexed with piperazine-urea… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6T1J
Type
protein
Length
143 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Protein enl
UniProt
Q03111
Ligands
M7T

Structure

x-ray diffraction · 1 distinct chain · 8% helix, 50% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AProtein enlprotein1438% helix, 50% strandQ03111

Ligands and binding sites

  • M7T · ~{N}-[[4-(pyrrolidin-1-ylmethyl)phenyl]methyl]-4-thiophen-2-ylcarbonyl-piperazine-1-carboxamide · ligand · chains A
  • EDO · 1,2-ethanediol · additive · 7 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6T1J · Crystal structure of MLLT1 (ENL) YEATS domain in complexed with piperazine-urea… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q03111 · AlphaFold monomer V2.0 prediction for protein enl (Q03111) · a predicted model of the same protein · chain A against A, TM-score 0.98

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