Research workbench
Structure of trypanosome brucei phosphofructokinase in complex with AMP.
Analyse Structure of trypanosome brucei phosphofructokinase in complex with AMP. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6SY7
- Type
- protein
- Length
- 3,618 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O15648
- Ligands
- BNZ, AMP
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 455 | — | O15648 |
| B | — | protein | 454 | — | O15648 |
| C | — | protein | 451 | — | O15648 |
| D | — | protein | 452 | — | O15648 |
| E | — | protein | 450 | — | O15648 |
| F | — | protein | 450 | — | O15648 |
| G | — | protein | 452 | — | O15648 |
| H | — | protein | 454 | — | O15648 |
Ligands and binding sites
- BNZ · Benzene · ligand · 8 copies · chains A, B, C, D, E, F, G, H
- AMP · Adenosine monophosphate · ligand · 8 copies · chains A, B, C, D, E, F, G, H
- GOL · Glycerol · additive · 8 copies · chains A, B, C, D, E, F, G, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6SY7 · Structure of Trypanosome Brucei Phosphofructokinase in complex with AMP. · the same entry in another collection · chain H against H, TM-score 1.00
- O15648 · AlphaFold monomer V2.0 prediction for ATP-dependent 6-phosphofructokinase (O15648) · a predicted model of the same protein · chain E against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O15648
- Elsewhere: RCSB PDB 6SY7 · PDBe 6SY7 · UniProt O15648
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