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Lysostaphin SH3B P4-G5 complex, homesource dataset

Analyse Lysostaphin SH3B P4-G5 complex, homesource dataset in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6RJE
Type
protein
Length
93 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Lysostaphin
EC
3.4.24.75
UniProt
P10547
Ligands
K5T

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 57% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ALysostaphin (EC 3.4.24.75)protein930% helix, 57% strandP10547

Ligands and binding sites

  • K5T · (2~{R})-2-[[(2~{S})-2-[[(4~{R})-5-azanyl-4-[[(2~{S})-2-azanylpropanoyl]amino]-5-oxidanylidene-pentanoyl]amino]-6-[2-[2-[2-[2-(2-azanylethanoylamino) ethanoylamino]ethanoylamino]ethanoylamino]ethanoylamin o]hexanoyl]amino]propanoic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6RJE · Lysostaphin SH3b P4-G5 complex, homesource dataset · the same entry in another collection · chain A against A, TM-score 1.00
  • P10547 · AlphaFold monomer V2.0 prediction for lysostaphin (P10547) · a predicted model of the same protein · chain A against A, TM-score 0.98

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