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Crystal structure of REXO2

Analyse Crystal structure of REXO2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6RCI
Type: protein
Length: 326 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Oligoribonuclease, mitochondrial
EC: 3.1.-.-
UniProt: Q9Y3B8
Pockets: 1 · best druggability 0.69

Structure

x-ray diffraction · 2 distinct chains · 48% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Oligoribonuclease, mitochondrial (EC 3.1.-.-)	protein	180	51% helix, 18% strand	Q9Y3B8
B	Oligoribonuclease, mitochondrial (EC 3.1.-.-)	protein	146	45% helix, 23% strand	Q9Y3B8

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	736	0.69	0.77	78	empty

Interfaces

1 interface between chains.

A–B · 1723 Å² buried · 23 hydrogen bonds · protein-protein

Compared structures

6RCI · Crystal structure of REXO2 · the same entry in another collection · chain B against B, TM-score 1.00
Q9Y3B8 · AlphaFold monomer V2.0 prediction for oligoribonuclease, mitochondrial (Q9Y3B8) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9Y3B8
Elsewhere: RCSB PDB 6RCI · PDBe 6RCI · UniProt Q9Y3B8

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