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Structure of AFF4 C-terminal homology domain

Analyse Structure of AFF4 C-terminal homology domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6R80
Type: protein
Length: 224 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: AF4/FMR2 family member 4
UniProt: Q9UHB7
Pockets: 1 · best druggability 0.50

Structure

x-ray diffraction · 1 distinct chain · 75% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	AF4/FMR2 family member 4	protein	224	75% helix, 0% strand	Q9UHB7

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	136	0.50	0.80	25	empty

Modifications

Observed in the structure: 5 modified (engineered).

Compared structures

6R80 · Structure of AFF4 C-terminal homology domain · the same entry in another collection · chain A against A, TM-score 1.00
Q9UHB7 · AlphaFold monomer V2.0 prediction for AF4/FMR2 family member 4 (Q9UHB7) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9UHB7
Elsewhere: RCSB PDB 6R80 · PDBe 6R80 · UniProt Q9UHB7

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