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4'-phosphopantetheinyl transferase pptab from mycobacterium abscessus at pH 5.5 with MN2+ and CoA.

Analyse 4'-phosphopantetheinyl transferase pptab from mycobacterium abscessus at pH 5.5… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6QWU
Type: protein
Length: 219 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Possible 4'-phosphopantetheinyl transferase
UniProt: B1MD73
Ligands: COA, MN, NA
Pockets: 1 · best druggability 0.56

Structure

x-ray diffraction · 1 distinct chain · 31% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Possible 4'-phosphopantetheinyl transferase	protein	219	31% helix, 29% strand	B1MD73

Ligands and binding sites

COA · Coenzyme A · ligand · chains A
MN · Manganese (II) ion · metal · 2 copies · chains A
NA · Sodium ion · metal · chains A
PEG · Di(hydroxyethyl)ether · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	265	0.56	0.77	40	COA, MN, PEG

Compared structures

6QWU · 4'-phosphopantetheinyl transferase PptAb from Mycobacterium abscessus at pH 5.5 with Mn2+… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B1MD73
Elsewhere: RCSB PDB 6QWU · PDBe 6QWU · UniProt B1MD73

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