Research workbench
Structure of human mait a-F7 TCR in complex with human MR1-5'OH- pentyl-5-op-U
Analyse Structure of human mait a-F7 TCR in complex with human MR1-5'OH- pentyl-5-op-U in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6PUD
- Type
- protein
- Length
- 1,603 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q95460, P61769
- Ligands
- OYD
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 265 | — | Q95460 |
| B | — | protein | 98 | — | P61769 |
| C | — | protein | 266 | — | Q95460 |
| D | — | protein | 188 | — | — |
| E | — | protein | 241 | — | — |
| F | — | protein | 100 | — | P61769 |
| G | — | protein | 201 | — | — |
| H | — | protein | 244 | — | — |
Ligands and binding sites
- OYD · 6-[(5-hydroxypentyl)amino]-5-[(E)-propylideneamino]pyrimidine-2,4(1H,3H)-dione · ligand · 2 copies · chains A, G, H, C, D, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6PUD · Structure of human MAIT A-F7 TCR in complex with human MR1-5'OH-Pentyl-5-OP-U · the same entry in another collection · chain H against H, TM-score 1.00
- P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain B against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q95460
- Every structure of UniProt P61769
- Elsewhere: RCSB PDB 6PUD · PDBe 6PUD · UniProt Q95460 · UniProt P61769
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