Research workbench
T4 lysozyme mutant with cys 54 replaced by thr, cys 97 replaced by ala, thr 21 replaced by cys and lys 124 replaced by cys (C54T,C97A, T21C,K124C)
Analyse T4 lysozyme mutant with cys 54 replaced by thr, cys 97 replaced by ala, thr 21… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1B6I
- Type
- protein
- Length
- 162 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein (lysozyme)
- EC
- 3.2.1.17
- UniProt
- P00720
- Pockets
- 1 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 65% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein (lysozyme) (EC 3.2.1.17) | protein | 162 | 65% helix, 9% strand | P00720 |
Ligands and binding sites
- HED · 2-hydroxyethyl disulfide · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 256 | 0.53 | 0.76 | 30 | empty |
Compared structures
- 1B6I · T4 lysozyme mutant with cys 54 replaced by thr, cys 97 replaced by ala, thr 21 replaced… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00720
- Elsewhere: RCSB PDB 1B6I · PDBe 1B6I · UniProt P00720
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