Research workbench
Casposase bound to integration product
Analyse Casposase bound to integration product in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6OPM
- Type
- protein + DNA
- Length
- 1,463 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0F8IEL4
- Ligands
- CA
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, D | — | protein | 341 | — | A0A0F8IEL4 |
| B | — | protein | 354 | — | A0A0F8IEL4 |
| C | — | protein | 359 | — | A0A0F8IEL4 |
| E, F | — | dna | 21 | — | — |
| H, J | — | protein | 13 | — | — |
Ligands and binding sites
- CA · Calcium ion · metal · 6 copies · chains A, F, C, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6OPM · Casposase bound to integration product · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0F8IEL4
- Elsewhere: RCSB PDB 6OPM · PDBe 6OPM · UniProt A0A0F8IEL4
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.