Research workbench
Structure of escherichia COLI dgtpase bound to GTP
Analyse Structure of escherichia COLI dgtpase bound to GTP in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6OIX
- Type
- protein
- Length
- 2,851 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P15723
- Ligands
- GTP, MN
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 477 | — | P15723 |
| B | — | protein | 471 | — | P15723 |
| C | — | protein | 478 | — | P15723 |
| D | — | protein | 472 | — | P15723 |
| E | — | protein | 478 | — | P15723 |
| F | — | protein | 475 | — | P15723 |
Ligands and binding sites
- GTP · Guanosine-5'-triphosphate · ligand · 6 copies · chains A, B, C, D, E, F
- MN · Manganese (II) ion · metal · 6 copies · chains A, B, C, D, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6OIX · Structure of Escherichia coli dGTPase bound to GTP · the same entry in another collection · chain F against F, TM-score 1.00
- P15723 · AlphaFold monomer V2.0 prediction for deoxyguanosinetriphosphate triphosphohydrolase… · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P15723
- Elsewhere: RCSB PDB 6OIX · PDBe 6OIX · UniProt P15723
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