Research workbench
Crystal structure of ribose-5-phosphate isomerase B from mycoplasma genitalium with bound ribulose-5-phosphate
Analyse Crystal structure of ribose-5-phosphate isomerase B from mycoplasma genitalium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6MU0
- Type
- protein
- Length
- 152 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Probable ribose-5-phosphate isomerase B
- EC
- 5.3.1.6
- UniProt
- P47636
- Ligands
- 5RP
Structure
x-ray diffraction · 1 distinct chain · 49% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable ribose-5-phosphate isomerase B (EC 5.3.1.6) | protein | 152 | 49% helix, 16% strand | P47636 |
Ligands and binding sites
- 5RP · Ribulose-5-phosphate · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 modified (oxidation).
Compared structures
- 6MU0 · Crystal Structure of Ribose-5-phosphate Isomerase B from Mycoplasma genitalium with bound… · the same entry in another collection · chain A against A, TM-score 1.00
- P47636 · AlphaFold monomer V2.0 prediction for probable ribose-5-phosphate isomerase B (P47636) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P47636
- Elsewhere: RCSB PDB 6MU0 · PDBe 6MU0 · UniProt P47636
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