Research workbench
Carbon regulatory pii-like protein sbtb from cyanobium sp. 7001 bound to ATP and calcium
Analyse Carbon regulatory pii-like protein sbtb from cyanobium sp. 7001 bound to ATP… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6MM2
- Type
- protein
- Length
- 99 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Carbon regulatory pii-like protein sbtb
- UniProt
- B5II98
- Ligands
- ATP, CA, CL
- Pockets
- 1 · best druggability 0.44
Structure
x-ray diffraction · 1 distinct chain · 29% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Carbon regulatory pii-like protein sbtb | protein | 99 | 29% helix, 38% strand | B5II98 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · chains A
- CA · Calcium ion · metal · chains A
- CL · Chloride ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 90 | 0.44 | 0.80 | 18 | ATP |
Compared structures
- 6MM2 · Carbon regulatory PII-like protein SbtB from Cyanobium sp. 7001 bound to ATP and calcium · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5II98
- Elsewhere: RCSB PDB 6MM2 · PDBe 6MM2 · UniProt B5II98
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.