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LIM5 domain of PINCH1 protein

Analyse LIM5 domain of PINCH1 protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6MIF
Type: protein
Length: 79 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lim and senescent cell antigen-like-containing domain protein 1
UniProt: P48059
Ligands: ZN

Structure

solution nmr · 1 distinct chain · 25% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lim and senescent cell antigen-like-containing domain protein 1	protein	79	25% helix, 20% strand	P48059

Ligands and binding sites

ZN · Zinc ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6MIF · Lim5 domain of PINCH1 protein · the same entry in another collection · chain A against A, TM-score 1.00
P48059 · AlphaFold monomer V2.0 prediction for lim and senescent cell antigen- like-containing… · a predicted model of the same protein · chain A against A, TM-score 0.64

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P48059
Elsewhere: RCSB PDB 6MIF · PDBe 6MIF · UniProt P48059

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