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Structure of ahsymrk kinase domain mutant - K625E

Analyse Structure of ahsymrk kinase domain mutant - K625E in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6M0U
Type: protein
Length: 273 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Symbiosis receptor kinase symrk
UniProt: E6YC17
Ligands: CA
Pockets: 1 · best druggability 0.67

Structure

x-ray diffraction · 1 distinct chain · 47% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Symbiosis receptor kinase symrk	protein	273	47% helix, 14% strand	E6YC17

Ligands and binding sites

CA · Calcium ion · metal · chains A
CAC · Cacodylate ion · additive · chains A
PGE · Triethylene glycol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	228	0.67	0.84	30	empty

Compared structures

6M0U · Structure of AhSYMRK kinase domain mutant - K625E · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt E6YC17
Elsewhere: RCSB PDB 6M0U · PDBe 6M0U · UniProt E6YC17

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