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Domain-swapped dimer structure of a single-chain monellin LOOP1- DELTA4-qvvag mutant

Analyse Domain-swapped dimer structure of a single-chain monellin LOOP1- DELTA4-qvvag… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6LAY
Type
protein
Length
184 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Monellin chain B,MONELLIN chain a
UniProt
P02882, P02881

Structure

x-ray diffraction · 1 distinct chain · 18% helix, 54% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BMonellin chain B,MONELLIN chain aprotein9218% helix, 54% strandP02882, P02881

Interfaces

1 interface between chains.

  • A–B · 2741 Ų buried · 37 hydrogen bonds · protein-protein

Compared structures

  • 6LAY · Domain-swapped dimer structure of a Single-chain Monellin loop1-delta4-QVVAG mutant · the same entry in another collection · chain A against A, TM-score 1.00
  • P02882 · AlphaFold monomer V2.0 prediction for monellin chain B (P02882) · a predicted model of the same protein · chain A against A, TM-score 0.51
  • P02881 · AlphaFold monomer V2.0 prediction for monellin chain a (P02881) · a predicted model of the same protein · chain A against A, TM-score 0.47

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