Research workbench
Zinc-finger antiviral protein (zap) bound to RNA
Analyse Zinc-finger antiviral protein (zap) bound to RNA in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6L1W
- Type
- protein + RNA
- Length
- 221 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q3UPF5
- Ligands
- ZN
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 215 | — | Q3UPF5 |
| C | — | rna | 6 | — | — |
Ligands and binding sites
- ZN · Zinc ion · metal · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6L1W · Zinc-finger Antiviral Protein (ZAP) bound to RNA · the same entry in another collection · chain A against A, TM-score 1.00
- Q3UPF5 · AlphaFold monomer V2.0 prediction for zinc finger ccch-type antiviral protein 1 (Q3UPF5) · a predicted model of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3UPF5
- Elsewhere: RCSB PDB 6L1W · PDBe 6L1W · UniProt Q3UPF5
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.