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Crystal structure of human leucyl-tRNA synthetase, ATP-bound form

Analyse Crystal structure of human leucyl-tRNA synthetase, ATP-bound form in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6KID
Type
protein
Length
1,005 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q9P2J5
Ligands
ATP, PO4

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein1005—Q9P2J5

Ligands and binding sites

  • ATP · Adenosine-5'-triphosphate · ligand · chains A
  • PO4 · Phosphate ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6KID · Crystal structure of human leucyl-tRNA synthetase, ATP-bound form · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9P2J5 · AlphaFold monomer V2.0 prediction for leucine--tRNA ligase, cytoplasmic (Q9P2J5) · a predicted model of the same protein · chain A against A, TM-score 0.98

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