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The crystal structure of light-driven cyanobacterial chloride importer from mastigocladopsis repens

Analyse The crystal structure of light-driven cyanobacterial chloride importer from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6K6I
Type: protein
Length: 219 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cyanobacterial chloride importer
Ligands: OLA, RET, CL
Pockets: 1 · best druggability 0.79

Structure

x-ray diffraction · 1 distinct chain · 81% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cyanobacterial chloride importer	protein	219	81% helix, 3% strand	—

Ligands and binding sites

OLA · Oleic acid · ligand · 14 copies · chains A
RET · Retinal · ligand · chains A
CL · Chloride ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	137	0.79	0.96	25	RET

Modifications

Observed in the structure: 1 cofactor (retinal Schiff base).

Compared structures

6K6I · The crystal structure of light-driven cyanobacterial chloride importer from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 6K6I · PDBe 6K6I

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