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Crystal structure analysis of tric counter-ion channels in calcium release

Analyse Crystal structure analysis of tric counter-ion channels in calcium release in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6IZ6
Type: protein
Length: 224 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Trimeric intracellular cation channel type B-B
UniProt: Q6GN30
Ligands: CA
Pockets: 2 · best druggability 0.61

Structure

x-ray diffraction · 1 distinct chain · 76% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Trimeric intracellular cation channel type B-B	protein	224	76% helix, 0% strand	Q6GN30

Ligands and binding sites

CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	323	0.61	0.79	42	empty
2	164	0.47	0.76	20	empty

Compared structures

6IZ6 · Crystal Structure Analysis of TRIC counter-ion channels in calcium release · the same entry in another collection · chain A against A, TM-score 1.00
Q6GN30 · AlphaFold monomer V2.0 prediction for trimeric intracellular cation channel type B-B… · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6GN30
Elsewhere: RCSB PDB 6IZ6 · PDBe 6IZ6 · UniProt Q6GN30

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