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Zinc finger domain of the human dtx protein

Analyse Zinc finger domain of the human dtx protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6IR0
Type: protein
Length: 76 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Probable E3 ubiquitin-protein ligase DTX2
EC: 2.3.2.27
UniProt: Q86UW9
Ligands: ZN

Structure

solution nmr · 1 distinct chain · 13% helix, 7% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Probable E3 ubiquitin-protein ligase DTX2 (EC 2.3.2.27)	protein	76	13% helix, 7% strand	Q86UW9

Ligands and binding sites

ZN · Zinc ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6IR0 · Zinc finger domain of the human DTX protein · the same entry in another collection · chain A against A, TM-score 1.00
Q86UW9 · AlphaFold monomer V2.0 prediction for probable E3 ubiquitin-protein ligase DTX2 (Q86UW9) · a predicted model of the same protein · chain A against A, TM-score 0.77

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q86UW9
Elsewhere: RCSB PDB 6IR0 · PDBe 6IR0 · UniProt Q86UW9

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