Research workbench

The crystal structure of the DNXF2 uba domain in complex with panoramix

Analyse The crystal structure of the DNXF2 uba domain in complex with panoramix in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6IEW
Type: protein
Length: 91 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Fusion protein of nuclear RNA export factor 2 and protein panoramix
UniProt: Q9VV73, Q9W2H9

Structure

x-ray diffraction · 1 distinct chain · 73% helix, 2% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Fusion protein of nuclear RNA export factor 2 and protein panoramix	protein	91	73% helix, 2% strand	Q9VV73, Q9W2H9

Ligands and binding sites

GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6IEW · The crystal structure of the dNxf2 UBA domain in complex with Panoramix · the same entry in another collection · chain A against A, TM-score 1.00
Q9VV73 · AlphaFold monomer V2.0 prediction for nuclear RNA export factor 2 (Q9VV73) · a predicted model of the same protein · chain A against A, TM-score 0.59
Q9W2H9 · AlphaFold monomer V2.0 prediction for protein panoramix (Q9W2H9) · a predicted model of the same protein · chain A against A, TM-score 0.29

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9VV73
Every structure of UniProt Q9W2H9
Elsewhere: RCSB PDB 6IEW · PDBe 6IEW · UniProt Q9VV73 · UniProt Q9W2H9

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