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Solution structure of TRIM28 ring domain

Analyse Solution structure of TRIM28 ring domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6I9H
Type: protein
Length: 92 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Transcription intermediary factor 1-beta
EC: 2.3.2.27
UniProt: Q13263
Ligands: ZN

Structure

solution nmr · 1 distinct chain · 14% helix, 13% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Transcription intermediary factor 1-beta (EC 2.3.2.27)	protein	92	14% helix, 13% strand	Q13263

Ligands and binding sites

ZN · Zinc ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6I9H · Solution structure of TRIM28 RING domain · the same entry in another collection · chain A against A, TM-score 1.00
Q13263 · AlphaFold monomer V2.0 prediction for transcription intermediary factor 1-beta (Q13263) · a predicted model of the same protein · chain A against A, TM-score 0.56

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q13263
Elsewhere: RCSB PDB 6I9H · PDBe 6I9H · UniProt Q13263

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