Tarp-udp-glcnac-3RBOP

Structure

x-ray diffraction · 9 distinct chains.

Ligands and binding sites

• FQ8 · [(2~{R},3~{S},4~{S})-2,3,4,5-tetrakis(oxidanyl)pentyl] [(2~{R},3~{R},4~{S})-2,3,4-tris(oxidanyl)-5-[oxidanyl-[(2~{R},3~{S},4~{S})-2,3,4-tris(oxidanyl)-5-phosphonooxy-pentoxy]phosphoryl]oxy-pentyl] hydrogen phosphate · ligand · 12 copies · chains B, C, F, O, P, E, G, Q, A, D, H, I
• UD1 · Uridine-diphosphate-N-acetylglucosamine · ligand · 11 copies · chains B, C, F, O, E, G, Q, A, D, H, I
• UDP · Uridine-5'-diphosphate · ligand · chains P
• MG · Magnesium ion · metal · 15 copies · chains B, C, F, O, E, G, Q, A, P, D, H, I
• CL · Chloride ion · ion · 12 copies · chains B, C, F, O, P, E, A, H, D, I

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

• 6H4M · TarP-UDP-GlcNAc-3RboP · the same entry in another collection · chain B against B, TM-score 1.00

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt A0A0H3JNB0
• Elsewhere: RCSB PDB 6H4M · PDBe 6H4M · UniProt A0A0H3JNB0