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Receptor-bound ghrelin conformation

Analyse Receptor-bound ghrelin conformation in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6H3E
Type: protein
Length: 18 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Appetite-regulating hormone
UniProt: Q9UBU3
Ligands: FKZ, NH2

Structure

solution nmr · 1 distinct chain · 0% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Appetite-regulating hormone	protein	18	0% helix, 0% strand	Q9UBU3

Ligands and binding sites

FKZ · octan-1-amine · ligand · chains A
NH2 · Amino group · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 covalent (covalent ligand).

Compared structures

6H3E · Receptor-bound Ghrelin conformation · the same entry in another collection · chain A against A, TM-score 1.00
Q9UBU3 · AlphaFold monomer V2.0 prediction for appetite-regulating hormone (Q9UBU3) · a predicted model of the same protein · chain A against A, TM-score 0.14

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9UBU3
Elsewhere: RCSB PDB 6H3E · PDBe 6H3E · UniProt Q9UBU3

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