Research workbench
Crystal structure of lipase from geobacillus stearothermophilus T6 variant L184F/L360F
Analyse Crystal structure of lipase from geobacillus stearothermophilus T6 variant… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6FZC
- Type
- protein
- Length
- 392 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lipase
- EC
- 3.1.1.3
- UniProt
- Q93A71
- Ligands
- ZN, CA
- Pockets
- 3 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lipase (EC 3.1.1.3) | protein | 392 | 34% helix, 16% strand | Q93A71 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 197 | 0.53 | 0.78 | 22 | empty |
| 2 | 65 | 0.34 | 0.77 | 19 | empty |
| 3 | 65 | 0.29 | 0.74 | 20 | empty |
Compared structures
- 6FZC · Crystal Structure of lipase from Geobacillus stearothermophilus T6 variant L184F/L360F · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q93A71
- Elsewhere: RCSB PDB 6FZC · PDBe 6FZC · UniProt Q93A71
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