GL1X · GenesisL1 explorer

Research workbench

The crystal structure of encm L144M mutant complex with dioxygen under 15 bars O2 pressure

Analyse The crystal structure of encm L144M mutant complex with dioxygen under 15 bars… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6FYC
Type
protein
Length
906 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Putative FAD-dependent oxygenase encm
UniProt
Q9KHK2
Ligands
FAD, OXY
Pockets
2 · best druggability 0.86

Structure

x-ray diffraction · 1 distinct chain · 35% helix, 25% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BPutative FAD-dependent oxygenase encmprotein45335% helix, 25% strandQ9KHK2

Ligands and binding sites

  • FAD · Flavin-adenine dinucleotide · ligand · 2 copies · chains A, B
  • OXY · Oxygen molecule · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
16800.860.9083FAD, OXY
27060.860.8984FAD, OXY

Compared structures

  • 6FYC · The crystal structure of EncM L144M mutant complex with dioxygen under 15 bars O2 pressure · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.