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Crystal structure of S-adenosyl-L-homocysteine hydrolase from pseudomonas aeruginosa in complex with adenine and rb+ cation
Analyse Crystal structure of S-adenosyl-L-homocysteine hydrolase from pseudomonas… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6F3Q
- Type
- protein
- Length
- 1,841 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9I685
- Ligands
- NAD, ADE, RB, PO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 460 | — | Q9I685 |
| D | — | protein | 461 | — | Q9I685 |
Ligands and binding sites
- NAD · Nicotinamide-adenine-dinucleotide · ligand · 4 copies · chains A, B, C, D
- ADE · Adenine · ligand · 4 copies · chains A, B, C, D
- RB · Rubidium ion · metal · 5 copies · chains A, B, C, D
- PO4 · Phosphate ion · ion · 8 copies · chains A, C, B, D
- PEG · Di(hydroxyethyl)ether · additive · chains B
- GOL · Glycerol · additive · chains D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6F3Q · Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa in… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9I685 · AlphaFold monomer V2.0 prediction for adenosylhomocysteinase (Q9I685) · a predicted model of the same protein · chain D against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9I685
- Elsewhere: RCSB PDB 6F3Q · PDBe 6F3Q · UniProt Q9I685
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