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Crystal structure of SNX15 px domain in domain swapped conformation

Analyse Crystal structure of SNX15 px domain in domain swapped conformation in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6ECM
Type
protein
Length
98 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Sorting nexin-15
UniProt
Q9NRS6
Ligands
SO4

Structure

x-ray diffraction · 1 distinct chain · 46% helix, 27% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASorting nexin-15protein9846% helix, 27% strandQ9NRS6

Ligands and binding sites

  • SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6ECM · Crystal Structure of SNX15 PX domain in domain swapped conformation · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9NRS6 · AlphaFold monomer V2.0 prediction for sorting nexin-15 (Q9NRS6) · a predicted model of the same protein · chain A against A, TM-score 0.86

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