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Crystal structure of RNase SA3, cytotoxic microbial ribonuclease

Analyse Crystal structure of RNase SA3, cytotoxic microbial ribonuclease in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1MGW
Type
protein
Length
99 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Guanyl-specific ribonuclease SA3
EC
3.1.27.3
UniProt
P30289
Ligands
LI

Structure

x-ray diffraction · 1 distinct chain · 15% helix, 20% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AGuanyl-specific ribonuclease SA3 (EC 3.1.27.3)protein9915% helix, 20% strandP30289

Ligands and binding sites

  • LI · Lithium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

  • 1MGW · Crystal structure of RNase Sa3, cytotoxic microbial ribonuclease · the same entry in another collection · chain A against A, TM-score 1.00
  • P30289 · AlphaFold monomer V2.0 prediction for guanyl-specific ribonuclease SA3 (P30289) · a predicted model of the same protein · chain A against A, TM-score 0.96

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