Research workbench
Structure of methylphosphate capping enzyme methyltransferase domain in complex with 5' end of 7SK RNA
Analyse Structure of methylphosphate capping enzyme methyltransferase domain in complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6DCB
- Type
- protein + RNA
- Length
- 262 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q7L2J0
- Ligands
- SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | rna | 36 | — | — |
| A | — | protein | 226 | — | Q7L2J0 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6DCB · Structure of methylphosphate capping enzyme methyltransferase domain in complex with 5'… · the same entry in another collection · chain B against B, TM-score 1.00
- Q7L2J0 · AlphaFold monomer V2.0 prediction for 7SK snrna methylphosphate capping enzyme (Q7L2J0) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7L2J0
- Elsewhere: RCSB PDB 6DCB · PDBe 6DCB · UniProt Q7L2J0
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