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M. thermoresistible GUAB2 delta-cbs in complex with inhibitor compound 14 (VCC900455)

Analyse M. thermoresistible GUAB2 delta-cbs in complex with inhibitor compound 14… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6D4Q
Type
protein
Length
331 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Inosine-5'-monophosphate DEHYDROGENASE,INOSINE-5'- monophosphate dehydrogenase
EC
1.1.1.205
UniProt
G7CNL4
Ligands
IMP, FWG
Pockets
1 · best druggability 0.73

Structure

x-ray diffraction · 1 distinct chain · 37% helix, 19% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AInosine-5'-monophosphate DEHYDROGENASE,INOSINE-5'- monophosphate dehydrogenase (EC 1.1.1.205)protein33137% helix, 19% strandG7CNL4

Ligands and binding sites

  • IMP · Inosinic acid · ligand · chains A
  • FWG · cycloheptyl{4-[(isoquinolin-5-yl)sulfonyl]piperazin-1-yl}methanone · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
13800.730.8439IMP, FWG

Compared structures

  • 6D4Q · M. thermoresistible GuaB2 delta-CBS in complex with inhibitor Compound 14 (VCC900455) · the same entry in another collection · chain A against A, TM-score 1.00

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