Research workbench
2.75 ångström resolution crystal structure of udp-N-acetylglucosamine 1-carboxyvinyltransferase from pseudomonas putida in complex with uridine-diphosphate-2(N-acetylglucosaminyl) butyric acid, (2R)-2- (PHOSPHONOOXY)PROPANOIC acid and magnesium
Analyse 2.75 ångström resolution crystal structure of udp-N-acetylglucosamine… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6CN1
- Type
- protein
- Length
- 3,370 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q88P88
- Ligands
- EPU, 0V5, MG, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, H | — | protein | 422 | — | Q88P88 |
| B, C, D, E, F, G | — | protein | 421 | — | Q88P88 |
Ligands and binding sites
- EPU · Uridine-diphosphate-2(N-acetylglucosaminyl) butyric acid · ligand · 8 copies · chains A, B, C, D, E, F, G, H
- 0V5 · (2R)-2-(phosphonooxy)propanoic acid · ligand · 8 copies · chains A, B, C, D, E, F, G, H
- MG · Magnesium ion · metal · 8 copies · chains A, B, C, D, E, F, G, H
- CL · Chloride ion · ion · 5 copies · chains A, C, F, H, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6CN1 · 2.75 Angstrom Resolution Crystal Structure of UDP-N-acetylglucosamine… · the same entry in another collection · chain G against G, TM-score 1.00
- Q88P88 · AlphaFold monomer V2.0 prediction for udp-N-acetylglucosamine 1-carboxyvinyltransferase… · a predicted model of the same protein · chain B against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q88P88
- Elsewhere: RCSB PDB 6CN1 · PDBe 6CN1 · UniProt Q88P88
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