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Structure of P. aeruginosa R2 pyocin fiber PA0620 comprising C- terminal residues 323-691

Analyse Structure of P. aeruginosa R2 pyocin fiber PA0620 comprising C- terminal… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6CL6
Type
protein
Length
2,184 residues
Chains
6
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
G3XD71
Ligands
CA, FE, MG

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B, C, D, E, F—protein364—G3XD71

Ligands and binding sites

  • CA · Calcium ion · metal · 6 copies · chains A, C, B, D, F, E
  • FE · Fe (III) ion · metal · 2 copies · chains A, B, C, D, E, F
  • MG · Magnesium ion · metal · 2 copies · chains A, C, D, E, F
  • EDO · 1,2-ethanediol · additive · 22 copies · chains A, C, B, D, E, F

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6CL6 · Structure of P. aeruginosa R2 pyocin fiber PA0620 comprising C-terminal residues 323-691 · the same entry in another collection · chain A against A, TM-score 1.00

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