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Swgmmgmlasq segment from the low complexity domain of tdp-43

Analyse Swgmmgmlasq segment from the low complexity domain of tdp-43 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6CFH
Type: protein
Length: 22 residues
Chains: 2
Method: electron crystallography
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Tar DNA-binding protein 43
UniProt: Q13148

Structure

electron crystallography · 1 distinct chain · 0% helix, 82% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Tar DNA-binding protein 43	protein	11	0% helix, 82% strand	Q13148

Interfaces

1 interface between chains.

A–B · 479 Å² buried · 18 hydrogen bonds · protein-protein

Compared structures

6CFH · SWGMMGMLASQ segment from the low complexity domain of TDP-43 · the same entry in another collection · chain A against A, TM-score 1.00
Q13148 · AlphaFold monomer V2.0 prediction for tar DNA-binding protein 43 (Q13148) · a predicted model of the same protein · chain A against A, TM-score 0.45

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q13148
Elsewhere: RCSB PDB 6CFH · PDBe 6CFH · UniProt Q13148

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