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Glucan binding protein C of streptococcus mutans mediates both sucrose-independent and sucrose-dependent adherence

Analyse Glucan binding protein C of streptococcus mutans mediates both… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6CAM
Type: protein
Length: 351 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Glucan-binding protein C
UniProt: Q5R1S1
Ligands: BGC, CA
Pockets: 1 · best druggability 0.63

Structure

x-ray diffraction · 1 distinct chain · 23% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Glucan-binding protein C	protein	351	23% helix, 30% strand	Q5R1S1

Ligands and binding sites

BGC · beta-D-glucopyranose · sugar · 2 copies · chains A
CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	337	0.63	0.79	47	CA, BGC

Compared structures

6CAM · Glucan Binding Protein C of Streptococcus mutans Mediates both Sucrose-Independent and… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5R1S1
Elsewhere: RCSB PDB 6CAM · PDBe 6CAM · UniProt Q5R1S1

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