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Crystal structure of murine CD300LF in complex with phosphocholine

Analyse Crystal structure of murine CD300LF in complex with phosphocholine in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6C74
Type
protein
Length
111 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
CMRF35-like molecule-1
UniProt
Q6SJQ7
Ligands
PC, CA

Structure

x-ray diffraction · 1 distinct chain · 8% helix, 50% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACMRF35-like molecule-1protein1118% helix, 50% strandQ6SJQ7

Ligands and binding sites

  • PC · Phosphocholine · ligand · chains A
  • CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

  • 6C74 · Crystal Structure of Murine CD300lf in complex with phosphocholine · the same entry in another collection · chain A against A, TM-score 1.00
  • Q6SJQ7 · AlphaFold monomer V2.0 prediction for CMRF35-like molecule 1 (Q6SJQ7) · a predicted model of the same protein · chain A against A, TM-score 0.98

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