Research workbench
Avra DELL154 with IP6, CoA
Analyse Avra DELL154 with IP6, CoA in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6BE0
- Type
- protein
- Length
- 266 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Avra
- UniProt
- E8XKZ3
- Ligands
- IHP, COA
- Pockets
- 3 · best druggability 0.44
Structure
x-ray diffraction · 1 distinct chain · 50% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Avra | protein | 266 | 50% helix, 17% strand | E8XKZ3 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 112 | 0.44 | 0.77 | 23 | empty |
| 2 | 113 | 0.42 | 0.76 | 24 | IHP |
| 3 | 74 | 0.37 | 0.77 | 18 | empty |
Compared structures
- 6BE0 · AvrA delL154 with IP6, CoA · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E8XKZ3
- Elsewhere: RCSB PDB 6BE0 · PDBe 6BE0 · UniProt E8XKZ3
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