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Synaptotagmin-7, C2A domain

Analyse Synaptotagmin-7, C2A domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6ANJ
Type: protein
Length: 138 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Synaptotagmin-7
UniProt: Q62747
Ligands: CA

Structure

x-ray diffraction · 1 distinct chain · 5% helix, 44% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Synaptotagmin-7	protein	138	5% helix, 44% strand	Q62747

Ligands and binding sites

CA · Calcium ion · metal · 3 copies · chains A
TBU · Tertiary-butyl alcohol · additive · 3 copies · chains A
ACT · Acetate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6ANJ · Synaptotagmin-7, C2A domain · the same entry in another collection · chain A against A, TM-score 1.00
Q62747 · AlphaFold monomer V2.0 prediction for synaptotagmin-7 (Q62747) · a predicted model of the same protein · chain A against A, TM-score 0.93

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q62747
Elsewhere: RCSB PDB 6ANJ · PDBe 6ANJ · UniProt Q62747

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