Research workbench
Binding and enhanced binding between key immunity proteins TRAF6 and tifa
Analyse Binding and enhanced binding between key immunity proteins TRAF6 and tifa in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5ZUJ
- Type
- protein
- Length
- 165 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- TNF receptor-associated factor 6; Peptide 170-184 from traf-interacting protein with fha…
- EC
- 2.3.2.27
- UniProt
- Q9Y4K3, Q96CG3
Structure
x-ray diffraction · 2 distinct chains · 15% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TNF receptor-associated factor 6 (EC 2.3.2.27) | protein | 153 | 16% helix, 42% strand | Q9Y4K3 |
| I | Peptide 170-184 from traf-interacting protein with fha domain-containing protein a | protein | 12 | 0% helix, 33% strand | Q96CG3 |
Interfaces
1 interface between chains.
- A–I · 617 Ų buried · 19 hydrogen bonds · protein-protein
Compared structures
- 5ZUJ · Binding and Enhanced Binding between Key Immunity Proteins TRAF6 and TIFA · the same entry in another collection · chain A against A, TM-score 1.00
- Q9Y4K3 · AlphaFold monomer V2.0 prediction for TNF receptor-associated factor 6 (Q9Y4K3) · a predicted model of the same protein · chain A against A, TM-score 0.98
- Q96CG3 · AlphaFold monomer V2.0 prediction for traf-interacting protein with fha domain-containing… · a predicted model of the same protein · chain I against A, TM-score 0.45
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y4K3
- Every structure of UniProt Q96CG3
- Elsewhere: RCSB PDB 5ZUJ · PDBe 5ZUJ · UniProt Q9Y4K3 · UniProt Q96CG3
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