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Dodecameric structure of a small heat shock protein from mycobacterium marinum M: form-2
Analyse Dodecameric structure of a small heat shock protein from mycobacterium marinum… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5ZS6
- Type
- protein
- Length
- 116 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Molecular chaperone (small heat shock protein); Gly-arg-leu-leu
- UniProt
- B2HF11
- Ligands
- PRO, NA, CL
Structure
x-ray diffraction · 2 distinct chains · 3% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Molecular chaperone (small heat shock protein) | protein | 112 | 3% helix, 46% strand | B2HF11 |
| U | Gly-arg-leu-leu | protein | 4 | 0% helix, 25% strand | — |
Ligands and binding sites
- PRO · Proline · ligand · chains A
- NA · Sodium ion · metal · chains A
- CL · Chloride ion · ion · 2 copies · chains A
- PEG · Di(hydroxyethyl)ether · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–U · 290 Ų buried · 2 hydrogen bonds · protein-protein
Compared structures
- 5ZS6 · Dodecameric structure of a small Heat Shock Protein from Mycobacterium marinum M: Form-2 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2HF11
- Elsewhere: RCSB PDB 5ZS6 · PDBe 5ZS6 · UniProt B2HF11
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