Research workbench
Crystal structure of daxx helical bundle domain in complex with atrx
Analyse Crystal structure of daxx helical bundle domain in complex with atrx in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5Y18
- Type
- protein
- Length
- 102 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Death domain-associated protein 6; Transcriptional regulator atrx
- EC
- 3.6.4.12
- UniProt
- Q9UER7, P46100
Structure
x-ray diffraction · 2 distinct chains · 79% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Death domain-associated protein 6 | protein | 85 | 78% helix, 2% strand | Q9UER7 |
| B | Transcriptional regulator atrx (EC 3.6.4.12) | protein | 17 | 88% helix, 0% strand | P46100 |
Interfaces
1 interface between chains.
- A–B · 580 Ų buried · 7 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 modified (engineered).
Compared structures
- 5Y18 · Crystal structure of DAXX helical bundle domain in complex with ATRX · the same entry in another collection · chain A against A, TM-score 1.00
- Q9UER7 · AlphaFold monomer V2.0 prediction for death domain-associated protein 6 (Q9UER7) · a predicted model of the same protein · chain A against A, TM-score 0.94
- P46100 · AlphaFold monomer V2.0 prediction for transcriptional regulator atrx (P46100) · a predicted model of the same protein · chain B against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UER7
- Every structure of UniProt P46100
- Elsewhere: RCSB PDB 5Y18 · PDBe 5Y18 · UniProt Q9UER7 · UniProt P46100
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