Research workbench
The structure of the dolichos biflorus seed lectin in complex with the forssman disaccharide
Analyse The structure of the dolichos biflorus seed lectin in complex with the forssman… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1LU1
- Type
- protein
- Length
- 253 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lectin
- UniProt
- P05045
- Ligands
- ADE, NGA, A2G, CA, MN
Structure
x-ray diffraction · 1 distinct chain · 9% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lectin | protein | 253 | 9% helix, 45% strand | P05045 |
Ligands and binding sites
- ADE · Adenine · ligand · chains A
- NGA · 2-acetamido-2-deoxy-beta-D-galactopyranose · sugar · chains A
- A2G · 2-acetamido-2-deoxy-alpha-D-galactopyranose · sugar · chains A
- CA · Calcium ion · metal · chains A
- MN · Manganese (II) ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1LU1 · The structure of the dolichos biflorus seed lectin in complex with the forssman… · the same entry in another collection · chain A against A, TM-score 1.00
- P05045 · AlphaFold monomer V2.0 prediction for seed lectin subunit I (P05045) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P05045
- Elsewhere: RCSB PDB 1LU1 · PDBe 1LU1 · UniProt P05045
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