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NMR structure and localization of a large fragment of the SARS-cov fusion protein: implications in viral cell fusion

Analyse NMR structure and localization of a large fragment of the SARS-cov fusion… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5XJK
Type
protein
Length
65 residues
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Spike protein S2
UniProt
P59594

Structure

solution nmr · 1 distinct chain · 43% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASpike protein S2protein6543% helix, 0% strandP59594

Compared structures

  • 5XJK · NMR Structure and Localization of a Large Fragment of the SARS-CoV Fusion Protein… · the same entry in another collection · chain A against A, TM-score 1.00
  • 3SCK · Crystal structure of spike protein receptor-binding domain from a predicted SARS… · a predicted model of the same protein · chain A against E, TM-score 0.23
  • 3SCK · Crystal structure of spike protein receptor-binding domain from a predicted SARS… · a predicted model of the same protein · chain A against E, TM-score 0.23
  • 3SCI · Crystal structure of spike protein receptor-binding domain from a predicted SARS… · a predicted model of the same protein · chain A against E, TM-score 0.22
  • 3SCI · Crystal structure of spike protein receptor-binding domain from a predicted SARS… · a predicted model of the same protein · chain A against E, TM-score 0.22
  • 3SCJ · Crystal structure of spike protein receptor-binding domain from a predicted SARS… · a predicted model of the same protein · chain A against E, TM-score 0.22
  • 3SCJ · Crystal structure of spike protein receptor-binding domain from a predicted SARS… · a predicted model of the same protein · chain A against E, TM-score 0.22

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