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Crystal structure of the medaka fish taste receptor T1R2A-T1R3 ligand binding domains in complex with L-glutamate
Analyse Crystal structure of the medaka fish taste receptor T1R2A-T1R3 ligand binding… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5X2P
- Type
- protein
- Length
- 2,598 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A173M0G2, A0A173M094
- Ligands
- NAG, BMA, NA, CA, CL
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 428 | — | A0A173M0G2 |
| B | — | protein | 454 | — | A0A173M094 |
| C | — | protein | 431 | — | A0A173M0G2 |
| D | — | protein | 415 | — | A0A173M094 |
| H | — | protein | 219 | — | — |
| L | — | protein | 217 | — | — |
| J | — | protein | 218 | — | — |
| K | — | protein | 216 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 27 copies · chains A, B, C, D
- BMA · beta-D-mannopyranose · sugar
- NA · Sodium ion · metal · 2 copies · chains A, C
- CA · Calcium ion · metal · chains K
- CL · Chloride ion · ion · 2 copies · chains B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5X2P · Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in… · the same entry in another collection · chain L against L, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A173M0G2
- Every structure of UniProt A0A173M094
- Elsewhere: RCSB PDB 5X2P · PDBe 5X2P · UniProt A0A173M0G2 · UniProt A0A173M094
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