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Crystal structure of the segment, liikgi, from the RRM2 of tdp-43, residues 248-253
Analyse Crystal structure of the segment, liikgi, from the RRM2 of tdp-43, residues… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5W50
- Type
- protein
- Length
- 12 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Tar DNA-binding protein 43
- UniProt
- Q13148
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Tar DNA-binding protein 43 | protein | 6 | 0% helix, 33% strand | Q13148 |
Interfaces
1 interface between chains.
- A–B · 189 Ų buried · 4 hydrogen bonds · protein-protein
Compared structures
- 5W50 · Crystal structure of the segment, LIIKGI, from the RRM2 of TDP-43, residues 248-253 · the same entry in another collection · chain A against A, TM-score 1.00
- Q13148 · AlphaFold monomer V2.0 prediction for tar DNA-binding protein 43 (Q13148) · a predicted model of the same protein · chain A against A, TM-score 0.84
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q13148
- Elsewhere: RCSB PDB 5W50 · PDBe 5W50 · UniProt Q13148
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