Research workbench
Solution NMR structure of human REV1 (932-1039) in complex with ubiquitin
Analyse Solution NMR structure of human REV1 (932-1039) in complex with ubiquitin in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5VZM
- Type
- protein
- Length
- 187 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ubiquitin; DNA repair protein REV1
- EC
- 2.7.7.-
- UniProt
- P0CG47, Q9UBZ9
Structure
solution nmr · 2 distinct chains · 29% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ubiquitin | protein | 76 | 24% helix, 34% strand | P0CG47 |
| B | DNA repair protein REV1 (EC 2.7.7.-) | protein | 111 | 33% helix, 0% strand | Q9UBZ9 |
Interfaces
1 interface between chains.
- A–B · 678 Ų buried · 4 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 5VZM · Solution NMR structure of human Rev1 (932-1039) in complex with ubiquitin · the same entry in another collection · chain A against A, TM-score 1.00
- Q9UBZ9 · AlphaFold monomer V2.0 prediction for DNA repair protein REV1 (Q9UBZ9) · a predicted model of the same protein · chain B against A, TM-score 0.33
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0CG47
- Every structure of UniProt Q9UBZ9
- Elsewhere: RCSB PDB 5VZM · PDBe 5VZM · UniProt P0CG47 · UniProt Q9UBZ9
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