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Crystal structure of frizzled 7 crd in complex with C24 fatty acid

Analyse Crystal structure of frizzled 7 crd in complex with C24 fatty acid in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5URV
Type
protein
Length
247 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
O75084
Ligands
1PG, NER, NAG, SO4

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein118—O75084
B—protein129—O75084

Ligands and binding sites

  • 1PG · 2-(2-{2-[2-(2-methoxy-ethoxy)-ethoxy]-ethoxy}-ethoxy)-ethanol · ligand · 3 copies · chains B, A
  • NER · (15E)-tetracos-15-enoic acid · ligand · chains A, B
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A, B
  • SO4 · Sulfate ion · ion · 8 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5URV · Crystal structure of Frizzled 7 CRD in complex with C24 fatty acid · the same entry in another collection · chain A against A, TM-score 1.00
  • O75084 · AlphaFold monomer V2.0 prediction for frizzled-7 (O75084) · a predicted model of the same protein · chain A against A, TM-score 0.99

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